PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80620.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 363aa    MW: 40493.3 Da    PI: 10.3426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.3e-18139189255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrdps +g   r++lg+f ta eAaka+++a+ +++g
  RWR80620.1 139 HYRGVRHRP-WGKFAAEIRDPSRRG--SRVWLGTFETAIEAAKAYDRAAFQMRG 189
                 7*****888.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MATIDEISVL DLIRQHLLAD FSSFDNFSFT SAPKPDTSDS SVIKPKLEPC TDSFHSETKV  60
KITDYLKEYD GDFIEMKPSP IKKLAADSKE KSNPRLQSIP ASAPPRRPSL KIALPPGPKL  120
ERPDRTDPPP AEVSVEKRHY RGVRHRPWGK FAAEIRDPSR RGSRVWLGTF ETAIEAAKAY  180
DRAAFQMRGS KAILNFPLEV GSSHGEPLAV CRKRRRVTEC DRSAAGVVEE RKQVKRERSP  240
GPDDVGSAGN IPLTPSSWAC VDLAGSFNVP PLSPLSPHPP LCCTQLKVQN PIRVGREKRM  300
QNPPIQLRLK LRKSNFPTFG AEPSGPQSQE TFYIFHLAAR KMHSTVSCNR NPLQLQSRRS  360
CKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212216RKRRR
2213217KRRRV
3213235KRRRVTECDRSAAGVVEERKQVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-38ERF family protein