PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WRKY | ||||||||
Protein Properties | Length: 199aa MW: 21835.6 Da PI: 9.7686 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.9 | 1.4e-25 | 132 | 192 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg+ WrKYGqKe+ g+++pr+Y+rCt++ gC+++k+v++s++dp++ ++tY g+H+++ RWR80504.1 132 DDGHIWRKYGQKEILGATYPRGYFRCTHKhdqGCQATKHVQKSENDPSLYVVTYMGQHTCK 192 8***************************99999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MGSTLSENSP PMPCDRQMVI QELINGQKLT SELQILFGKA SEQGVSPAAK ALAEKISRSI 60 AGAISILNSG ETHEGCWNSA TTHHCSAPSG DRKIKGSGEK QKIPAAKDQR SGHKRRRTST 120 TASRLLSATP YDDGHIWRKY GQKEILGATY PRGYFRCTHK HDQGCQATKH VQKSENDPSL 180 YVVTYMGQHT CKDVLKTPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 1e-29 | WRKY family protein |