PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YA | ||||||||
Protein Properties | Length: 324aa MW: 35236.4 Da PI: 8.8227 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.3 | 9.4e-32 | 156 | 212 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rak+e e+k +k+rkpy+heSRh hAlrR+Rg+gGrF RWR80323.1 156 DGPIYVNAKQYHGILRRRQSRAKAELENKA-IKARKPYMHESRHLHALRRARGCGGRF 212 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MQTVCFKDHG GTLQNPVTQA SAVPVVPWWG VAGSQPVVYH EQFGQLKSLS IDHPNGGQLS 60 GAPGQVHQGT NQGPSVAICV DEKYDQNKES VKGQKPLQLS TTISLHPERQ AHSEMGLGQT 120 MVCTNYPYMD QCYGLFSTYG AQATGRMLLP LNFTDDGPIY VNAKQYHGIL RRRQSRAKAE 180 LENKAIKARK PYMHESRHLH ALRRARGCGG RFLNTKSTNS RKEGSDSDKA SDGRVPQADG 240 SPSSEVLQSD SGNVNSAKEP CGSSSLSGSE VTSMYSQGDL GRFQIKNPHS SAFHAHSNMM 300 DNGPNINMAT KWVAADGRCD FLKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05690.1 | 2e-43 | NF-YA family protein |