PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80203.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 715aa MW: 82457 Da PI: 8.6012

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.4	8.5e-22	36	123	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+Y+k +GFs+rk++s++ ++ge+++++fvCs +gk++e++ +e +r+r++tr +Cka+l+vk +k+g ++v+k++ +H+H+ RWR80203.1 36 NFYNAYGKLAGFSIRKESSNRG-KDGEVVWKRFVCSGQGKTDEKHWIdKEFVQRRRMQTRFDCKAQLQVKIDKSGGYVVSKFVPQHSHA 123 6***************9998.8899**********999866356678899******************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MDTTPSSSSF VHYPVVDENT TPKLGMHFDD LDEAYNFYNA YGKLAGFSIR KESSNRGKDG 60 EVVWKRFVCS GQGKTDEKHW IDKEFVQRRR MQTRFDCKAQ LQVKIDKSGG YVVSKFVPQH 120 SHAPTTPSKR LMLRSRRQVP ESKRQIINTY DSANVRSKQQ MQVLASQSGG LDKIGFTDTN 180 AKNHRRDEKE KKRGLDGQLL FQLFENRKEM GSGFTYTIER DADKKITHVF WANGAFRSAY 240 KVFGDVVTFD TTYKTNCCGL TFAAFVGCNH HGQTTLFGCG FLPNEKTESF EWLFRKWLEA 300 MSFSPPKRII TDQDLAITKA IKNVMPNTVH RYCLWHILDK LPSNLGGVHI HNDGLIDMIK 360 KCVHNSQTSS HFESYWNQII TDNKLMENEW LADIYKIRHM WVPAYIKENF FGGMSTTHRS 420 ESMNAFVKQY VEYTNSLLDF ILRFDTGVER LRYLEKKEDF ENSNGRPEMK TCSPLEKQMA 480 NIYTKNLFYK FQDELFMIMS LGVKLVTEDD VSCNFVVKNF LDEQEIEREI LWKKDEMHAY 540 CSCKKFEFEG IPCRHLLSVL RHLSIPYVPE RYILKQWTKG VTKEILVDDV EIGSATVNSC 600 LARHSHLSCM FAGLIDIASQ SREGFEFLVS SYTELEMKLR QVTLNNPTDI SIDNGEGLVD 660 SNVVEYHEPS HAVTKGCAKR LKSSKENATK GRLCRGCNKR GVSHDKRNCP VLLNK

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MDTTPSSSSF VHYPVVDENT TPKLGMHFDD LDEAYNFYNA YGKLAGFSIR KESSNRGKDG  60
EVVWKRFVCS GQGKTDEKHW IDKEFVQRRR MQTRFDCKAQ LQVKIDKSGG YVVSKFVPQH  120
SHAPTTPSKR LMLRSRRQVP ESKRQIINTY DSANVRSKQQ MQVLASQSGG LDKIGFTDTN  180
AKNHRRDEKE KKRGLDGQLL FQLFENRKEM GSGFTYTIER DADKKITHVF WANGAFRSAY  240
KVFGDVVTFD TTYKTNCCGL TFAAFVGCNH HGQTTLFGCG FLPNEKTESF EWLFRKWLEA  300
MSFSPPKRII TDQDLAITKA IKNVMPNTVH RYCLWHILDK LPSNLGGVHI HNDGLIDMIK  360
KCVHNSQTSS HFESYWNQII TDNKLMENEW LADIYKIRHM WVPAYIKENF FGGMSTTHRS  420
ESMNAFVKQY VEYTNSLLDF ILRFDTGVER LRYLEKKEDF ENSNGRPEMK TCSPLEKQMA  480
NIYTKNLFYK FQDELFMIMS LGVKLVTEDD VSCNFVVKNF LDEQEIEREI LWKKDEMHAY  540
CSCKKFEFEG IPCRHLLSVL RHLSIPYVPE RYILKQWTKG VTKEILVDDV EIGSATVNSC  600
LARHSHLSCM FAGLIDIASQ SREGFEFLVS SYTELEMKLR QVTLNNPTDI SIDNGEGLVD  660
SNVVEYHEPS HAVTKGCAKR LKSSKENATK GRLCRGCNKR GVSHDKRNCP VLLNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-129	FAR1 family protein