PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79842.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27140.8 Da PI: 7.6252 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.6 | 1.2e-14 | 79 | 129 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++hn++Er RR+++Ns +++Lr+llP + ++kKls +++ ++ +YI +L RWR79842.1 79 KKMSHNANERDRRKKLNSLYSTLRSLLPVS---DQKKLSIPATVSLVLKYIPEL 129 789**************************9...9*****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MLALSPSSWF PTFGWPSDDN IGQDQNRWAE DYDHPFIKYK REIDGLDSCF RISSPQLMGA 60 IDSPKISPAT SEGISPNLKK MSHNANERDR RKKLNSLYST LRSLLPVSDQ KKLSIPATVS 120 LVLKYIPELK KQVERLTRRK EEILSQISSQ SDLTHLINGR KDANGPLGSS SFPSISTTQV 180 DEREVVVQIC TSDVQSIALS EIVSKLEEES LQIQNASSFT AAGGKVFHNL HLQVPFLFIQ 240 IGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 9e-44 | bHLH family protein |