PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79599.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family TCP
Protein Properties Length: 336aa    MW: 37342.1 Da    PI: 10.256
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.95e-401142674135
         TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec....eaessss 80 
                  + rhski T++g+RdRR+Rls+++a++fF Lqd+LGfdk+skti WL++++k+ai elt+                   +s+s+       e+ ++++
  RWR79599.1 114 NRERHSKIFTAQGLRDRRMRLSVDVARKFFGLQDMLGFDKASKTIGWLMTKSKTAINELTKGlsqsdgcggdsdggdqnlTSESED-IsgldETTADVN 211
                 689**********************************************************9888888888877777654333332.235555555555 PP

         TCP  81 sasnsssgkaaksaakskksq.ksaasalnlakesrakarararertrekmriknk 135
                 +++n+ ++k+  +a+k + +q +++ +    akesra ara+arertrekm++k +
  RWR79599.1 212 QQENDLKQKSLVAAPKVNWNQgSKKVAICPAAKESRAIARAKARERTREKMSKKLD 267
                 555555557777777554444044445677778******************99855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MFPFNHGKNC IPHSYDADQC LLGEQTFSRN EPTSSFIQFS PFLDHNTRFL NYEHEMLSRH  60
LTKPPQMVST FTAITSVANV GANNTEMAVL GTTQKMLFSK KSSPVAVGRK RSSNRERHSK  120
IFTAQGLRDR RMRLSVDVAR KFFGLQDMLG FDKASKTIGW LMTKSKTAIN ELTKGLSQSD  180
GCGGDSDGGD QNLTSESEDI SGLDETTADV NQQENDLKQK SLVAAPKVNW NQGSKKVAIC  240
PAAKESRAIA RAKARERTRE KMSKKLDKSK QLPNGSTHGP YGLKPLSPPG FPRESSSRIS  300
HDKKSTTNEP NKLGLSTYDY YQHISNWVVR SMSPTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-24TCP family protein