PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79425.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 339aa MW: 37238.7 Da PI: 6.4264

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.9e-17	31	76	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + RWR79425.1 31 KGPWSPEEDAILSRLVVKFGARNWSLIARGIS-GRSGKSCRLRWCNQ 76 79****************************.*********985 PP
2	Myb_DNA-binding	58.7	1.3e-18	83	127	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ RWR79425.1 83 RKPFTEEEDRIIVAAHAIHGNR-WASIARLLQ-GRTDNAIKNHWNST 127 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MKEEELEAAS AATADCSSGL RARAGSEDRV KGPWSPEEDA ILSRLVVKFG ARNWSLIARG 60 ISGRSGKSCR LRWCNQLDPG VKRKPFTEEE DRIIVAAHAI HGNRWASIAR LLQGRTDNAI 120 KNHWNSTLRR RSTERSKATS CDMLEDISLE KTEEFSSEET LSPGDIKCFK PWEGKDVPNS 180 LENASDQFED KFGSRDNHGR TEPKDLPNLI RPVARVSAFS PYNPEGGQTN SSLLPRTGPL 240 HVPSIPSAKL DVEICKILEG VYGEPHVPSR CAHGCGWIQS THPQSSLLGP EFVEFMESPP 300 ISSHELVSIA SELSNISWLK SGLENSGIKL SDNSGSQLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-91	MYB family protein