PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | TCP | ||||||||
Protein Properties | Length: 178aa MW: 18196.3 Da PI: 10.4546 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 93.4 | 4.7e-29 | 44 | 115 | 6 | 77 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaes 77 + ++++h kv+gR+ RvR++a caar+F+L++eLG+ + ++tieWLl+ a+p+i+++tg+ s RWR79393.1 44 SATKDRHIKVNGRGCRVRIPAVCAARIFQLTRELGHRSEGETIEWLLRHAEPSIIAATGSglvpspaaaaA----------S 115 569*********************************************************55544332220..........1 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MGSSSEPILN TGASDSAMIS SSPSSSSSKN TRILSKRNSS SSSSATKDRH IKVNGRGCRV 60 RIPAVCAARI FQLTRELGHR SEGETIEWLL RHAEPSIIAA TGSGLVPSPA AAAASSSAPP 120 PPPNDAVSAP APPFFVAVPG LNFNPAASVG LGFSGGSGFG YFPFTAPTMS EQQQQRGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58100.1 | 1e-29 | TCP family protein |