PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | SRS | ||||||||
Protein Properties | Length: 321aa MW: 33654.1 Da PI: 7.9871 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 219.6 | 6.6e-68 | 96 | 249 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsa...lsstklssaesk 97 g++sCqdCGnqakkdC+h+RCRtCCksrgf+C th+kstWvpa++rrerq+qlaaa++ + +++ ++ ++kr+re+ +++++a l++t+l+s++ RWR79156.1 96 GGSMSCQDCGNQAKKDCSHMRCRTCCKSRGFQCPTHIKSTWVPASRRRERQHQLAAAAAAQHEQQqQHLNPKRHRETAAAAAAAagpLACTRLPSSSG- 193 5789***********************************************99998877666555366788899988555444411145566555532. PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + + ++P+e+ seavfrcvrvs++dd +e++aYqtavsi+GhvfkGiLyd+G+++ RWR79156.1 194 -MEVAGNFPAELTSEAVFRCVRVSGIDDPDEQYAYQTAVSISGHVFKGILYDHGPDS 249 .334456************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MAGFSLGGGG GGNQDQQGIP PESFFLYNTT TTRGEEYTRG FELWQQQQQH QHQQQQRNLF 60 YSGGVGVGLG SDEGAGGAVG SGGSSSSRTV MMTRQGGSMS CQDCGNQAKK DCSHMRCRTC 120 CKSRGFQCPT HIKSTWVPAS RRRERQHQLA AAAAAQHEQQ QQHLNPKRHR ETAAAAAAAA 180 GPLACTRLPS SSGMEVAGNF PAELTSEAVF RCVRVSGIDD PDEQYAYQTA VSISGHVFKG 240 ILYDHGPDSS HYSAGEASTS PAVISGRMGS NPPPITAGPS GGSSAGASAA AAAALLDPSS 300 LYPTPLNAFM AGTQFFPHPR S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 4e-64 | SRS family protein |