PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79087.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 300aa MW: 34291.9 Da PI: 10.2283

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.7	8.7e-18	143	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k +++s+v++ +l lp kf+++h + +++ +++led++g +++ + +++ + l++GW++F+ ++gL+egD +vF+l++ +f +v +++ RWR79087.1 143 FVKSMLRSHVSSCFWLGLPTKFCKDHL-P-PRELKMILEDQNGSEYDAIY--IGSRTG--LSGGWRGFALEHGLDEGDALVFELSKPARF--KVYIVK 232 89*******************9995.3.35569***********..566544..*********************9875555..777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MARIRNTNRN NPHNNNNSSY EEARKQRLQE NLKRFQALGI MNISKSLSQV TNSSKKSELS 60 PVKTKSKISL ENLELRRSSR ERVVIPTYQE KFVWLKSVYL IFLPSYPKRS LGVGRVPSNE 120 ERLHALESAE KLRSNLGSGH PSFVKSMLRS HVSSCFWLGL PTKFCKDHLP PRELKMILED 180 QNGSEYDAIY IGSRTGLSGG WRGFALEHGL DEGDALVFEL SKPARFKVYI VKASEFSKED 240 NKEKILETKG ESTDEPVETQ KLIQDDNESV SQELKQENGS KRRAETQRAV KRGKREQPLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	2e-49	B3 family protein