PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79076.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 267aa    MW: 29989.7 Da    PI: 8.3584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-21114165156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 ++y+GVr+++ +grW+AeIrdp     r kr++lg+f+taeeAa  ++ a++kl+g+
  RWR79076.1 114 TRYRGVRRRP-WGRWAAEIRDPA----RrKRVWLGTFDTAEEAATVYDTAALKLRGP 165
                 68********.**********82....35**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MNPAVERCRR SASPGTCVKF SEHVLTTTKS VSGGKLAAES QDLPAEAETV RRKVVRIIFT  60
DADATDSSSE DDAEITRRVK RHVHQIDIRA PANVRRAAQV RRRPVPDRGD RIRTRYRGVR  120
RRPWGRWAAE IRDPARRKRV WLGTFDTAEE AATVYDTAAL KLRGPSAVTN FPSANTETVA  180
PAEIWNVSSP TSVLPCGVMT PLYCLDYGSV DAFGFDVESP LPLPGEKWPK WYFRDKQEQE  240
FCEFDADYFS SFDCPFGSSQ EVYIPGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120139RRRPWGRWAAEIRDPARRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.11e-19ERF family protein