PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR78868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 209aa MW: 23211.7 Da PI: 10.1148 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.3 | 1.9e-15 | 32 | 78 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRR+riN+ +++Lr+l+P+a +Kl+Ka+ L ++++++k+L RWR78868.1 32 QSHSQAEKRRRERINTHLSTLRRLVPSA-----TKLDKATLLGRVIDHVKEL 78 79**************************.....9****************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MVLPWPPHVS TSSCQVGGSE TSKEAKALIS SQSHSQAEKR RRERINTHLS TLRRLVPSAT 60 KLDKATLLGR VIDHVKELKR KALEIGNSFT VPTETDDVTV ECDRNGALKD RFIIRASLCC 120 DDRPELYTDL IQALHGLKLR TVRADMATLG GRVKNVLILS TKVGEEGACL STLKDSLKEV 180 LGRIVFTDVS SQNTNLSKRQ RTMPSFWSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G25710.1 | 2e-35 | bHLH family protein |