PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | Whirly | ||||||||
Protein Properties | Length: 237aa MW: 26778.7 Da PI: 10.1037 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 181.4 | 1.7e-56 | 59 | 195 | 2 | 138 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100 ++k+kaal++ +v p+f++++sg+++l+r+G ++l++ +a+++rkydW+k+q+falsa e+++l++l++ +sceffhdp++++s +G+vrk+++v Pl+ RWR78673.1 59 IFKGKAALSMYPVPPKFNKMNSGSIHLERRGVVMLTFWPAIGQRKYDWQKRQHFALSAVELGSLISLGPTDSCEFFHDPSMNTSLAGQVRKTFQVSPLS 157 9************************************************************************************************** PP Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 d G+++n+sv n +k ne+fsvPvskaefav+r+ + RWR78673.1 158 DDGGYYFNMSVVNPNQKINERFSVPVSKAEFAVMRTSF 195 ***********************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MMKLSRFFLS RSADNIKTSR IKDSLWSHNS TSLASISTAR ENLVTGGKYE GRPFVDYPIF 60 KGKAALSMYP VPPKFNKMNS GSIHLERRGV VMLTFWPAIG QRKYDWQKRQ HFALSAVELG 120 SLISLGPTDS CEFFHDPSMN TSLAGQVRKT FQVSPLSDDG GYYFNMSVVN PNQKINERFS 180 VPVSKAEFAV MRTSFSYILP HIMGWDCFTS PQPETTLKVN PPKQPGPLLS PDLEWNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 1e-69 | Whirly family protein |