PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28107.5 Da PI: 6.103 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15 | 4.6e-05 | 38 | 86 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f eL +l + + + Ka+iL A++ +++L RWR78399.1 38 KIHKAEREKLKRDHLNELFLELGHVLEPG----RQNNGKASILGDATRILRDL 86 567889****************9988884....57888999**9999988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MVSDLSLPMA AESNVVNENS VSSRSLPNKK NPGKVPKKIH KAEREKLKRD HLNELFLELG 60 HVLEPGRQNN GKASILGDAT RILRDLFAQV ECLRKENVAL VTESHYVTVE KNELKDETVV 120 LGGEIEKLQN ELQQRMRSEA GWCNGLGPVQ SQHANLVSSF PEDRLSDDNA SQPPPVVGPV 180 FVLPFHPEVQ AYQELDTVKA LPSKPTSHVR RPQPRYPTPA DTWPSQLLAH TGETQEAQII 240 SSTSTSNGES GSSSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 5e-37 | bHLH family protein |