PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 314aa MW: 35138.6 Da PI: 7.3697 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++q+G g+W+++++ g+ R+ k+c++rw +yl RWR78390.1 14 KGPWTPEEDIALVAYIQQYGAGNWRAVPANTGLSRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ + E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l RWR78390.1 67 RGNFAENEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 799999****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MGRPPCCDKT GMKKGPWTPE EDIALVAYIQ QYGAGNWRAV PANTGLSRCS KSCRLRWTNY 60 LRPGIKRGNF AENEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLRKKLKKLQ 120 TGLDGNMNDG LSGFQQISKG QWEKRLQTDI HMARQALCDA LSLEKPNNIP LSDSKASTGV 180 YPNTTRSTQS SSTYAWSTEN VSRLLEGWMK TDPKRPPQTN SQAKNPCATK MLSPEALESL 240 LTFDSSTSDT SQSVSFEETM NYGSDAALFH AESKPSLGGP VPLMMLERWL FDEAVAQGQD 300 ELMDIPLDEN NELV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 1e-104 | MYB family protein |