PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | Dof | ||||||||
Protein Properties | Length: 494aa MW: 53904.6 Da PI: 6.5098 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.5 | 3.5e-39 | 120 | 180 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s+ RWR78377.1 120 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNST 180 7899******************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 494 aa Download sequence |
MSETRDPAIK LFGMTIPVPT HGAGEGIGTE DGGASPDGNN KSKEEEEEKD LSNETTEDKE 60 KHEAIQISED PAEPGTSSGI NESPKPPSID QETSTATEAT EVEKEQTDTS ISKEKTLKKP 120 DKILPCPRCN SLDTKFCYYN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKNST 180 SHYRHLTVPE AFQTVRTNTS ESIDSPQLKP NGSVLSFGLD APLCESMASA LNLAEKTMQN 240 SHRNGFHTTD HEEARFPGSC GRENAEEHSH SSASAVTASK NSMEEGKPLN LQEPATLDRQ 300 VFPPRVQYFA GAPWNNPWHS AQWRSPLPPP PLQTLPPPPA FCASSFPISF YPATPYWGCA 360 MPGSWTAPWP PPLASSPNTG SSGSGSSSPK LGKHSREGNT CDAENGDTSK QSNSERCLWI 420 PKTLRIDDPD EAAKSSIWAT LRIKNNKANA IKGGGLFKAF QPKTDDKNHM MDTPKVLHAN 480 PAALSRSLNF QESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47500.1 | 6e-84 | Dof family protein |