PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR78020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB_related | ||||||||
Protein Properties | Length: 140aa MW: 15936.6 Da PI: 4.6916 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.4e-18 | 6 | 48 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eE++ l++a++ G++ W+ Ia+ ++ gRt++++k++w++ RWR78020.1 6 TWTEEEEKALIKAHEAVGNK-WTEIAKSIP-GRTENSVKNHWNST 48 7*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MQKDSTWTEE EEKALIKAHE AVGNKWTEIA KSIPGRTENS VKNHWNSTKR MQLSKKDQKE 60 AENGSKKSQS SLLEDYIRSK IMGMEQSNES EGKNITEDMI MKSHASGGGE ADVQDYELLF 120 GEHDYEMDIS FLLEWATTST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 8e-27 | MYB family protein |