PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77896.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 292aa    MW: 32900.8 Da    PI: 4.1466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.9e-09113154854
                 HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  Er+RR+r+N+ +  Lr+l+P  +      K++K +iL  A  Y+++L
  RWR77896.1 113 SERNRRKRLNQQLLALRSLVPCiS------KMDKRSILMDAATYLQNL 154
                 6*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEFENLNFWS PESGDSDGVF RQIPDCPSAI FSPIQCDYGS YLEYMEMELL QGGAREPMMM  60
MMEEEEEDKS GGGNEEEEPE EDDNGRGEGG VVLDGGATDD GILGNGGCKN LLSERNRRKR  120
LNQQLLALRS LVPCISKMDK RSILMDAATY LQNLHREIEE VKREIATQET SDTSTTSSES  180
NLPSPEETIQ CNESSPPQHQ ILNIDIEEMD ERTFAVKVVF RRAQGAVCQV QCMIESLGLN  240
ISNTWTHEID RHQMITTSFL QVKKQMNLTP EILKVQINKA AFKFGLDVDM DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-11bHLH family protein