PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77855.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 398aa    MW: 44340.7 Da    PI: 4.8318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.96.7e-07204245854
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y+ks 
  RWR77855.1 204 SERNRRKRLSQQLLALRALVPNI-----TKMDKRSVLVDALAYLKSI 245
                 6*********************7.....6***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
METEMGPYEL SQTPMSTKMS CADIISSWLE NDDIYTPTFS QELLDMHMID DSFLQFGQSD  60
FETDHFSLNP PHDDSNDDSF LLHLSNFHAD PTTESGLCNS LLAGISVAEE PTTNSAALIE  120
GDDSDCFFND ALCLIAPGER QESFFDYVLG SASTPATTSS SAANPLMWET TNVGRSHSQE  180
DEEEEEETDD DRKPGALNCK NLVSERNRRK RLSQQLLALR ALVPNITKMD KRSVLVDALA  240
YLKSIHEETA RIQTELKERS SSSSSSFRYN HSSLQPPPPY QKNSETLVPS HTLAPLPPRK  300
SSKLKAHILE IDVEKIEERR FVVKITCKGG ASVGAVVLRV IESLGFEITY TALEHIKPLH  360
VLTTVFVRVR KRGRMTEEKL KDSITSAALK SGVKLQNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.21e-14bHLH family protein