PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77653.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 307aa    MW: 33231.9 Da    PI: 5.9396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.8e-11171218455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  RWR77653.1 171 SHSLAERARREKISERMKILQDLVPGC----NKVIGKAVVLDEIINYIQSLQ 218
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDPPSLIHGH SPNARSPAAS GPSFGLADIW PLDSANVLGI QSRRGHLGQD LGFSESLRDG  60
SAAEESTVTE QSGRLGGGGG GGRKRREATA VAASEDEASK PASTSSGNDV TDSNGKRLKV  120
MGSRGEDEDS KEVEASSGNG NMMAEQNAQP SEAQKQDYIH VRARRGQATD SHSLAERARR  180
EKISERMKIL QDLVPGCNKV IGKAVVLDEI INYIQSLQRQ VEFLSMKIEA VNTRMHPGVE  240
VFPAKDIKSS IDCKESDKQI GEAVKQLSFW KEFGLQTYDT AGMPFTSQAT RDYGQGSPPE  300
WLHMQVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-71bHLH family protein