PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77504.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 791aa MW: 90974.4 Da PI: 7.4571

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.3	9.4e-27	110	192	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA +vGFsvr + ++s r+g+++ +fvCskeg+r+e++ + +raetr gCka++kv+k ++gkw vt++ +eHnHel RWR77504.1 110 FYYDYAMRVGFSVRSNLRRRSMRDGSTIALEFVCSKEGFRREKHPS------KRAETRNGCKAMIKVRKAESGKWAVTRFLNEHNHELE 192 9**************************************98777......99*******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MIHQNNIFVG DFFVLISAFF RLFLLLNCKM DPRITRSTAS KEPQLGSGRS GSGEGRMTVD 60 MNAPLREMDE VVENPDERAL ERAPLESEGA QNGEPCIGME FDSEDAVKTF YYDYAMRVGF 120 SVRSNLRRRS MRDGSTIALE FVCSKEGFRR EKHPSKRAET RNGCKAMIKV RKAESGKWAV 180 TRFLNEHNHE LETPRKLPLL RARRRISNAV KNPNYTPSLR KRTLGRDSQY LLDYFKGMQV 240 KNPSFFYAVR LDDEYRMTNF FWIDARSRMA YNYFGDVVIF DTTYKTNRYG MPFAPFLGAN 300 HHKQPISFGC ALLLDESEAS LVWLFSTWLE AMSGRYPISI VAEHDPAIGA AIAKVFPKTN 360 YRFCKRHIIR EFHDRLGHVD SDHKDFIKDF FECINMTELN DEFDSRWWSF INKYGLKDNE 420 WLQSLYKTRE QWVQVYLQDT FIANISVDQL SENINSFFGG YLKIHTPLQE FVEQLEKIIN 480 SQHEKELEDD SKTRNTKPLS KTGLPMESQV AEIYTTAIFL EFQEQLFQSL RHIADIMKED 540 GPIITFRVAE FGVGKTVYAV TLDVMDVKAS CSCQMFEYAG IPCRHILRVF SVKNIMLLPS 600 NYILKRWTRN ATMRVVPDDH NIEIQGGCQE SRSLRYDDLC RQAVKYASEG ATTSNIYNVA 660 MRALRKAFEE VVASKKDDWM VGQPSSLINF GAHQDSICEG SLPDNTAGHA ALLDPRRRAT 720 RGHPTTRFLL ENQRLHGGIA GELGFPDRIL GVPTNSAMDL YEPSGIFTLE HDNFPQVAHG 780 TSFRDRDTFP Q

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MIHQNNIFVG DFFVLISAFF RLFLLLNCKM DPRITRSTAS KEPQLGSGRS GSGEGRMTVD  60
MNAPLREMDE VVENPDERAL ERAPLESEGA QNGEPCIGME FDSEDAVKTF YYDYAMRVGF  120
SVRSNLRRRS MRDGSTIALE FVCSKEGFRR EKHPSKRAET RNGCKAMIKV RKAESGKWAV  180
TRFLNEHNHE LETPRKLPLL RARRRISNAV KNPNYTPSLR KRTLGRDSQY LLDYFKGMQV  240
KNPSFFYAVR LDDEYRMTNF FWIDARSRMA YNYFGDVVIF DTTYKTNRYG MPFAPFLGAN  300
HHKQPISFGC ALLLDESEAS LVWLFSTWLE AMSGRYPISI VAEHDPAIGA AIAKVFPKTN  360
YRFCKRHIIR EFHDRLGHVD SDHKDFIKDF FECINMTELN DEFDSRWWSF INKYGLKDNE  420
WLQSLYKTRE QWVQVYLQDT FIANISVDQL SENINSFFGG YLKIHTPLQE FVEQLEKIIN  480
SQHEKELEDD SKTRNTKPLS KTGLPMESQV AEIYTTAIFL EFQEQLFQSL RHIADIMKED  540
GPIITFRVAE FGVGKTVYAV TLDVMDVKAS CSCQMFEYAG IPCRHILRVF SVKNIMLLPS  600
NYILKRWTRN ATMRVVPDDH NIEIQGGCQE SRSLRYDDLC RQAVKYASEG ATTSNIYNVA  660
MRALRKAFEE VVASKKDDWM VGQPSSLINF GAHQDSICEG SLPDNTAGHA ALLDPRRRAT  720
RGHPTTRFLL ENQRLHGGIA GELGFPDRIL GVPTNSAMDL YEPSGIFTLE HDNFPQVAHG  780
TSFRDRDTFP Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-174	FAR1 family protein