PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77428.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 510aa MW: 56893.1 Da PI: 7.2691

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.7	1.5e-15	306	344	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+C+CkkskClk+YCeCf+ag++C C+CedC+N+ e RWR77428.1 306 CKRCHCKKSKCLKLYCECFSAGEYCVGLCSCEDCFNRPE 344 89**********************************876 PP
2	TCR	50.1	5.4e-16	392	430	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskC+kkYCeC++ag+ Cs C+C++C+N RWR77428.1 392 RHKRGCNCKKSKCQKKYCECYQAGVGCSIGCRCQGCENV 430 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MNLNKFISSR HVRDLSTCGQ LHSRSKDLEF KLFKESSGCS ISQRQKDEAK GKRKPKSEEK 60 ERKMSWKAPG MGFEFHGNGS PEMNPISTSS SSSSSSSSSS SLQPQHSRFF NYINNLPALN 120 LHNPAHGREA CRELNFSSRP QVFASPHVCS QYEAGLERRL QYQSISDAAK SFEHNVHGKM 180 LAAVPDVVQP SVNHSAVELI QSIRMGIEPA SILPQPLRSG WGSPNELLPD NDETLTSSTQ 240 DEENQAPENS FPNVESSLQN TLNEQHAMPF EMNRGAPEDV SCPEFNQRSD RRNRKKDPDN 300 VENEGCKRCH CKKSKCLKLY CECFSAGEYC VGLCSCEDCF NRPEYDDTVL EARQQIESRS 360 PFAFAPKIVQ FSIESPQNSV EGGSQTALAS SRHKRGCNCK KSKCQKKYCE CYQAGVGCSI 420 GCRCQGCENV YGNKGGSTQG FRIHGHSHQC LNLRDSMNGQ GFEDATASQF ERTLWGERFD 480 GESAPSGKDS NDVERCFSHV RTTTPEDRQL

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MNLNKFISSR HVRDLSTCGQ LHSRSKDLEF KLFKESSGCS ISQRQKDEAK GKRKPKSEEK  60
ERKMSWKAPG MGFEFHGNGS PEMNPISTSS SSSSSSSSSS SLQPQHSRFF NYINNLPALN  120
LHNPAHGREA CRELNFSSRP QVFASPHVCS QYEAGLERRL QYQSISDAAK SFEHNVHGKM  180
LAAVPDVVQP SVNHSAVELI QSIRMGIEPA SILPQPLRSG WGSPNELLPD NDETLTSSTQ  240
DEENQAPENS FPNVESSLQN TLNEQHAMPF EMNRGAPEDV SCPEFNQRSD RRNRKKDPDN  300
VENEGCKRCH CKKSKCLKLY CECFSAGEYC VGLCSCEDCF NRPEYDDTVL EARQQIESRS  360
PFAFAPKIVQ FSIESPQNSV EGGSQTALAS SRHKRGCNCK KSKCQKKYCE CYQAGVGCSI  420
GCRCQGCENV YGNKGGSTQG FRIHGHSHQC LNLRDSMNGQ GFEDATASQF ERTLWGERFD  480
GESAPSGKDS NDVERCFSHV RTTTPEDRQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-59	CPP family protein