PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR77188.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | YABBY | ||||||||
Protein Properties | Length: 140aa MW: 15858 Da PI: 8.9983 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 63.8 | 7.1e-20 | 1 | 57 | 1 | 57 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqll 57 ++++ +se+v yv+CnfCnt+lav vP + l+++vtv+CGhC++l ++++ +sq + RWR77188.1 1 MEHVPTSEHVYYVRCNFCNTVLAVGVPCKRLLETVTVKCGHCSNLSFLTIRAMSQSQ 57 57899****************************************999998887654 PP | |||||||
2 | YABBY | 88.1 | 2.3e-27 | 77 | 138 | 98 | 159 |
YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 ++ s+++++ +p+ p+v++PPek+ r Psaynrf+k+eiqrika nP+i hreafs+aakn RWR77188.1 77 GHSSSTSSQNVTPNSPNVVKPPEKKHRLPSAYNRFMKDEIQRIKAINPEIPHREAFSMAAKN 138 3444788899999999*********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MEHVPTSEHV YYVRCNFCNT VLAVGVPCKR LLETVTVKCG HCSNLSFLTI RAMSQSQYPD 60 LQLGFQSQGF SNDYKRGHSS STSSQNVTPN SPNVVKPPEK KHRLPSAYNR FMKDEIQRIK 120 AINPEIPHRE AFSMAAKNEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 1e-53 | YABBY family protein |