PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR77187.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | SBP | ||||||||
Protein Properties | Length: 552aa MW: 60204.4 Da PI: 8.0726 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.7 | 1.2e-41 | 162 | 238 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gC++dls+ k+yh+rhkvCe+hsk++ v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q RWR77187.1 162 CCQVHGCNVDLSSSKDYHKRHKVCEIHSKTARVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 238 6**************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 552 aa Download sequence |
MDSWSYGSVG TGLVLSDEMV SSSTDDALAK NRKVFANWDF KTPSSYESEM LVSGREAVGI 60 QGLGFSNGRV VSSSSSCGLI NPKMFLGEEE SGVSGTSSSV GEYSARDSSL IDLKLGRLAD 120 YRDTMSGKSL KEVKVSSSSI VSPMPPIKRS RLGNSNGQTT PCCQVHGCNV DLSSSKDYHK 180 RHKVCEIHSK TARVIVNGIE QRFCQQCSRF HLLAEFDDGK RSCRKRLAGH NERRRKPQLD 240 NHAGRTGKML SSCHGSSYLG ASLAAGASFV CSDMFPNGIV HGVKFENSNW FRNVKVEDDA 300 NPRPLVSVMN SHSFPKPIHT PFGMEKQLPS LRGIDTASVS MCYRNGNRYV QDFTGSQSIF 360 QNASSGAEEF ASFNTSSTME GVPGVSDSGC ALSLLSIQSQ NSSTPLSAIP MARPLTVQGR 420 QTHYRVEFPD KLLVVSSQPA TSVASNRFSS PGMEDDHMGA VLVSDDSNVV TFEAQEESDF 480 HTSRFLNTKD SVLCREHDHT IDLLPLSSQL QSVELQRHSA QVGKQCGKGE SKCFVWSLKQ 540 ARSSWSFKIV QS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 6e-44 | SBP family protein |