PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR77186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | GRAS | ||||||||
Protein Properties | Length: 427aa MW: 47611.8 Da PI: 7.8154 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 361.7 | 1e-110 | 54 | 425 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshlta 98 l++lLl+cA +vssg+l++a+a+L+++s+l+s +gd+mqRlaa+f+ La+rl++ ++++y al+ ++ +k + + + +l fs P++ f+h + RWR77186.1 54 LIQLLLTCAAHVSSGNLNRADACLQQISHLSSVSGDSMQRLAAHFASSLATRLLKGWPGVYTALNQTRLCSKPEPDPTRTARLaFSRSLPYVGFAHAII 152 689*************************************************************88887777776666666666*************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 ++I+ a+ +e+ vHi+D++ + ++ W ++l+a++ R+ +gpp l+iT v++ sk+ l +g++L k Ae+l++pf+fn+l +l+dl+l++L+v RWR77186.1 153 HRTIVHAMTEERVVHILDLGSGDPALWGPILRAFSRRSpHGPPYLKITSVHA----SKDVLDYLGSNLVKEAEALDIPFQFNPL-NLSLKDLTLDQLKV 246 *************************************99*************....***************************5.889*********** PP GRAS 197 kpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgr 292 ++gEalaV+++l+lh ll+e+++l+ + d +L +v+s+sPk++v+veqe+dhns+++++rf++ l++ysalfds+ea +++ s +er+ vE + lg RWR77186.1 247 RSGEALAVCSMLALHALLAEEACLNPckQMDVFLAMVRSMSPKLFVLVEQESDHNSTRLVDRFVQGLYHYSALFDSIEAAAGSLSgRERMAVEDM-LGA 344 ************************987799**************************************************9999999*******9.*** PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 ei+n+vaceg er+erhe++++W r+++aGF+pv+l a++++ +l++ ++ dg++v +e+ +++W++r+L+svSaW RWR77186.1 345 EIENIVACEGVERVERHERANRWMVRFGRAGFRPVRLWGVAVEEVMHLVESYGRDGFKVVSERMFEMICWHERALYSVSAW 425 ********************************************************************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence |
MVTSQYQTKT QQLEMESSPR PKKPLSLLNL TLSPNTSSKP PPQTSKPEDQ GLRLIQLLLT 60 CAAHVSSGNL NRADACLQQI SHLSSVSGDS MQRLAAHFAS SLATRLLKGW PGVYTALNQT 120 RLCSKPEPDP TRTARLAFSR SLPYVGFAHA IIHRTIVHAM TEERVVHILD LGSGDPALWG 180 PILRAFSRRS PHGPPYLKIT SVHASKDVLD YLGSNLVKEA EALDIPFQFN PLNLSLKDLT 240 LDQLKVRSGE ALAVCSMLAL HALLAEEACL NPCKQMDVFL AMVRSMSPKL FVLVEQESDH 300 NSTRLVDRFV QGLYHYSALF DSIEAAAGSL SGRERMAVED MLGAEIENIV ACEGVERVER 360 HERANRWMVR FGRAGFRPVR LWGVAVEEVM HLVESYGRDG FKVVSERMFE MICWHERALY 420 SVSAWHC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 9e-65 | GRAS family protein |