PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR76924.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 152aa MW: 16831.8 Da PI: 4.6076 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.5 | 4.6e-10 | 55 | 94 | 13 | 55 |
AP2 13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 g+++ eI dp++ + r++lg+f+ta+ Aa a+++a+++++g RWR76924.1 55 GKYATEIGDPTT---KERHWLGTFDTAQVAALAYDRAALAMKG 94 89*******965...5************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 152 aa Download sequence |
MGEGRWNLEM LWRDESLDVG ADVVGAGEEV EKTKNKQSFS QQRTDASIFL FSALGKYATE 60 IGDPTTKERH WLGTFDTAQV AALAYDRAAL AMKGTQARTD FIYFGITSFD TVLIPCDTQN 120 HTSIVQQLDV SCCCQRSSCV TPMKTSEAWQ GT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18560.1 | 2e-15 | ERF family protein |