PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26020.7 Da PI: 9.3387 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + + +r++lg+f+tae+Aa a+++a+++++g RWR76887.1 51 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEGAAMAYDRAALRFKG 100 7********.**********9...3.35***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MSAMVSALTH VIRASEAGAT APISGNPLPA PDSGSGEHPP SQEQVPSRRR HYRGVRQRPW 60 GKWAAEIRDP NKAARVWLGT FDTAEGAAMA YDRAALRFKG TKAKLNFPER VQGHTDMGFF 120 LSTPSASSNH ARPPSHELHL RPPPPPPQDP FPDLLQYAQL LRSGDEDFQF AASNLYSRDF 180 FASPPPDSSS TSSSSSSSSS FASQHDYMRF PSQFRSSSSS SDLPEQGKET GSNIKKEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 4e-45 | ERF family protein |