PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76855.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 503aa MW: 56322.7 Da PI: 5.9848

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4.2e-14	450	497	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +W+ eE+ell +avk++G+g+Wk I ++ + Rt+ ++k++w++ RWR76855.1 450 KWSLEEEELLREAVKEYGTGNWKPILKRYSdkfEERTAIDLKDKWRNM 497 8******************************9**********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDTNISSWIL EFLLRQPIDD WIPSTFISLL PPSDSDIRLK KTILLRRISS LLSKTSISES 60 ILKTLEIMEE IHHMSGTETH DSMRRAYSSV AVECAAKFLR EEPEDYSSFA DAVNRVWKGK 120 IGVMRRWGGG VGLVSDGLWD LEKEMLAAVE NPAVRRKLHG RETRKEALDA VRAFLEEAED 180 ELGPSFLEFA AEALLGKGEV GKNTILVENL NDGRVGKRGA VGLPEDDALD AEKGDFEGAR 240 KKCKLPFWIK DMRKGSLHPS EKDASVAVPS RDPLIATVEK VGTARVQNKF DILASSEVSK 300 AQEALKSSSV DLQTVVQDPL PDALEIAAGI LSNTGQANQK ESENNQNQLD VDTNTASVEK 360 HIDDNCMGDA GNGKQNAVKC DGKSWPGFMA RNRTAHTYEW DDDSIECPSD ASPNGSRKLC 420 LPSPERKAIS PLKKHDMNIT KFTRRRKIKK WSLEEEELLR EAVKEYGTGN WKPILKRYSD 480 KFEERTAIDL KDKWRNMTRY SAY

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDTNISSWIL EFLLRQPIDD WIPSTFISLL PPSDSDIRLK KTILLRRISS LLSKTSISES  60
ILKTLEIMEE IHHMSGTETH DSMRRAYSSV AVECAAKFLR EEPEDYSSFA DAVNRVWKGK  120
IGVMRRWGGG VGLVSDGLWD LEKEMLAAVE NPAVRRKLHG RETRKEALDA VRAFLEEAED  180
ELGPSFLEFA AEALLGKGEV GKNTILVENL NDGRVGKRGA VGLPEDDALD AEKGDFEGAR  240
KKCKLPFWIK DMRKGSLHPS EKDASVAVPS RDPLIATVEK VGTARVQNKF DILASSEVSK  300
AQEALKSSSV DLQTVVQDPL PDALEIAAGI LSNTGQANQK ESENNQNQLD VDTNTASVEK  360
HIDDNCMGDA GNGKQNAVKC DGKSWPGFMA RNRTAHTYEW DDDSIECPSD ASPNGSRKLC  420
LPSPERKAIS PLKKHDMNIT KFTRRRKIKK WSLEEEELLR EAVKEYGTGN WKPILKRYSD  480
KFEERTAIDL KDKWRNMTRY SAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-09	MYB_related family protein