PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76719.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 783aa    MW: 88117.8 Da    PI: 6.6614
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.21.4e-1134077772374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL++cA+av+ +d ++a++lL+++++++s +gd  qRla+ f+ +L+arla+ +s++y al ++  +    ++ l+a++l+  ++P+ k+sh+ a q
  RWR76719.1 407 RMLLIHCAQAVAVDDRRNAHELLKQIRQHSSRTGDGSQRLAHWFADGLEARLAGIGSQVYMALCAKGPK---AVDILKAYHLYLAACPFKKISHFFATQ 502
                 679**********************************************************99999988...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+ +++++r+Hi+ f+i  G+QWp++lq L++R++gpp++RiTg++ p++g   +e++eetg+rL+++A++++vpfe+++ +a ++e++++e+L+++
  RWR76719.1 503 TILNVAANAKRLHIVHFGIYFGFQWPCFLQRLSKRAGGPPRVRITGIDFPQPGfrPAERIEETGRRLEDYARSFNVPFEYTP-IACKWENIQVEDLKLE 600
                 ****************************************************9*****************************.6999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+V+++++ + llde+v ++s+r+ vL+ +++++P+v+++   +  ++++ F++rf eal + salfd+lea++pr++ er+ +Erel+g+e+vn
  RWR76719.1 601 KDEVLVVHCMFRFKGLLDETVVVDSPRNIVLNNIRKMNPDVFIHGVVNGAYSAPFFVTRFREALFHWSALFDMLEANVPRNHPERTYLERELFGQEAVN 699
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+aceg er+er et+++W+ r ++aG+k++pl+++++k+a+  +++ + + + v+e+s+++++gWk+r ++++S W+
  RWR76719.1 700 VIACEGLERVERPETYKQWQVRTMRAGLKQLPLDKEIMKKARDKVKNSYHKDFVVDEDSQWMLQGWKGRIIYALSTWK 777
                 *************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 783 aa     Download sequence    
MSSFNRRRGN SMVMDPGLCE LSAILSGGIR FDDSLQPNHN LSNGFKLQDP LPLHSIDHNI  60
ARPPPAFAPV EPNPIHHPQF LPPDPPQPNL NPVPSVTPEE DSDIFSDIAL KYISQMLLEE  120
DIIDEKSGTY QESLALRATE KPFYDILGKK YPPSPDQPSG HVDHHHTEST NDYYTNLSYS  180
SNLGGNWVCN VASDCPASQS VLTVSTDYTP QSSFTVSTDY TSQSSLCSSN SVGNVIEGLE  240
ESPPSLSRVS DFVSESQPVW QFRRVEEVSR LLPDGSNLIM GLESNGLFEQ EPKEETAVLE  300
VKVEEKGDRG PMVNGSRGRK NPNRVDLDLE EGRSNKQSAV YSDETVRSEM FDMVLLCGGK  360
CGPLSILQEF LQNAVSKSSQ NGQAKGSNGG GKSRGKKQGK KEVVDLRMLL IHCAQAVAVD  420
DRRNAHELLK QIRQHSSRTG DGSQRLAHWF ADGLEARLAG IGSQVYMALC AKGPKAVDIL  480
KAYHLYLAAC PFKKISHFFA TQTILNVAAN AKRLHIVHFG IYFGFQWPCF LQRLSKRAGG  540
PPRVRITGID FPQPGFRPAE RIEETGRRLE DYARSFNVPF EYTPIACKWE NIQVEDLKLE  600
KDEVLVVHCM FRFKGLLDET VVVDSPRNIV LNNIRKMNPD VFIHGVVNGA YSAPFFVTRF  660
REALFHWSAL FDMLEANVPR NHPERTYLER ELFGQEAVNV IACEGLERVE RPETYKQWQV  720
RTMRAGLKQL PLDKEIMKKA RDKVKNSYHK DFVVDEDSQW MLQGWKGRII YALSTWKPDE  780
IRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein