PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YB | ||||||||
Protein Properties | Length: 177aa MW: 19765.1 Da PI: 7.932 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 170 | 2.8e-53 | 30 | 125 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqd++lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc+rekrkt+ngdd++wal tlGf+dy+eplk yl+kyr+l+ge+ RWR76532.1 30 NEQDHLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCRREKRKTVNGDDICWALRTLGFDDYAEPLKRYLQKYRDLDGER 125 79******************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MVDSSPDSES HKYKAGGGAI SNTSGDGCMN EQDHLLPIAN VGRIMKQILP PNAKISKEAK 60 ETMQECVSEF ISFVTGEASD KCRREKRKTV NGDDICWALR TLGFDDYAEP LKRYLQKYRD 120 LDGERANSGG LNRGSNSVVK EEPTAIFRSE QERKQPSNPS LMKFNVIDRN NSSSRPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-57 | NF-YB family protein |