PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76461.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 373aa MW: 41692.3 Da PI: 4.6445 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l +++++ G g+W++ +++ g+ R++k+c++rw +yl RWR76461.1 14 KGRWTAEEDEILTRYIQENGEGSWRSLPKKAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eEd+ +++++ +G++ W++Ia +++ gRt++++k++w+++l RWR76461.1 67 RGNISAEEDDVIIKLHSSFGNR-WSLIAGYLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MGRAPCCEKV GLKKGRWTAE EDEILTRYIQ ENGEGSWRSL PKKAGLLRCG KSCRLRWINY 60 LREDIKRGNI SAEEDDVIIK LHSSFGNRWS LIAGYLPGRT DNEIKNYWNS HLSKRIRSFT 120 RPNKDGLSMP EDMGVGKIVG CCKRRGGRTS RSAMKNNLNL VEMGREKQHG KSVTPNLPQL 180 LDKEAQTWQC QNVGRESMAL GPSEDRETEG FGPHVGLKCG ILSCPNERMG SMGLATNEER 240 NSGERENGNL GTNEAIGDEF LCLDEGIDGP NEESEGGVVG ANKESESEVM GASEERRESE 300 WSSLAWFDDS VGGLQEEWEW NKLEDKMKAD GAGETWPWLQ SSSSNGDQDY LSMDEFEQEQ 360 IGAWLMPGDI DAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 2e-74 | MYB family protein |