PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR76368.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 166aa MW: 19028.5 Da PI: 4.6975 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.1 | 3.5e-07 | 90 | 132 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ eE +l+ a + g +W+ +a+++g g+t++++ +++ RWR76368.1 90 WSWEENKLFELALAIVDEGnpdRWNMVASMVG-GKTAEEVAEHF 132 ***************999999***********.********997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 166 aa Download sequence |
MSREAARVGF PQKRGLKREL MGNKVPEFPH RFGGLVASLE QGKWRRRRDG VAGKTESEHW 60 VILEDLLSEG ELRNWVVGTM EEIRGVCSGW SWEENKLFEL ALAIVDEGNP DRWNMVASMV 120 GGKTAEEVAE HFWILVEDLQ CIESGELDHR IEEEQLHPRV GMMETD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75250.2 | 3e-20 | MYB_related family protein |