PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR76283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 21133.7 Da PI: 9.3193 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f+tae+Aa+a+++a+++l+g RWR76283.1 28 HFRGVRKRP-WGRYAAEIRDpWK----KARVWLGTFDTAEDAARAYDNAARALRG 77 58*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MRKARAVAAT AAGTTPATNG LGVEKEIHFR GVRKRPWGRY AAEIRDPWKK ARVWLGTFDT 60 AEDAARAYDN AARALRGPKA KTNFPIYPPH FPNITNFHHQ PPPPRPTSSS LSSTVESFSG 120 PRLPIATARP PRRQLAPLPG DDCHSDCDSS SSVVDGTGDI VSSSTARKTF SFDLNLPPAD 180 DVDGELDLRC TALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 1e-25 | ERF family protein |