PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR75867.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 124aa MW: 13839.5 Da PI: 8.4954 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 106.5 | 1.6e-33 | 54 | 110 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 + vrYkeC+kNhAas+Gg+avDGC+Efm++ geeg+ +alkCaACgCHR+FHRreve+ RWR75867.1 54 KVVRYKECRKNHAASIGGYAVDGCREFMAA-GEEGSDDALKCAACGCHRSFHRREVEK 110 579**************************9.999*********************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 124 aa Download sequence |
MSSKIDKETQ EWSTSCVQRS VRIRIQEITD NLNKMRPQKG PEKVPNGSVV KREKVVRYKE 60 CRKNHAASIG GYAVDGCREF MAAGEEGSDD ALKCAACGCH RSFHRREVEK DDICDSSSTS 120 SSPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G74660.1 | 2e-26 | ZF-HD family protein |