PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR75795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 386aa MW: 43750.8 Da PI: 8.544 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.6e-16 | 122 | 167 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v ++G+ +W++Ia+++ gR++k+c++rw++ RWR75795.1 122 RGHWRPAEDAKLKELVSLYGPQNWNLIAQKLE-GRSGKSCRLRWFNQ 167 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 58.1 | 2e-18 | 174 | 218 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++++eE+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ + RWR75795.1 174 RRAFSEEEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHVL 218 678*******************.*********.***********987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 386 aa Download sequence |
MNMQQLHPNL YQRASDVEGF KKYTGINFSP SSNPTFGDLI STRDSNCKSS EMGFQVLSPS 60 LEQQQNKAWS SQCFNESRIQ RADGGGEGPY GNEKNGLSLK EERENSEAEK EHENGQFKLC 120 SRGHWRPAED AKLKELVSLY GPQNWNLIAQ KLEGRSGKSC RLRWFNQLDP RINRRAFSEE 180 EEERLLAAHR LYGNKWALIA RLFPGRTDNA VKNHWHVLMA RKNREQPSNY RRRKVSSPIL 240 HKRMEMNCNN ACSESTITST RDESASTCTD LSLNSSSRIL RMGLSRLSPT QQQQPYDFVL 300 GTDEKMAPPL RSPCYDKLDD SSNSVYHADP TVAGISVDQS NLLYSNFKIS ASESLANRSR 360 LNVYGVTDHG REINLPFIDF LGVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69560.1 | 4e-68 | MYB family protein |