PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75748.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 339aa MW: 38573.5 Da PI: 8.0813

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.2	1.8e-54	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+ +yLk+k++++++++ ++i+evdiyk++Pw+Lp +++ +ekewyfF++rd+ky++g r+nra++sgyWkatg+dk++ls+ ++e RWR75748.1 9 LPPGFRFHPTDEELILHYLKNKATSTPCPV-SIIAEVDIYKFDPWELPVQAAFGEKEWYFFTPRDRKYPNGARPNRAAASGYWKATGTDKPILSTvGKE 106 79**************************.89***********888889***********************************998999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kk Lvfykgr pkg+kt+W+mheyrl RWR75748.1 107 NIGVKKALVFYKGRPPKGVKTNWIMHEYRL 136 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MSKNPESSLP PGFRFHPTDE ELILHYLKNK ATSTPCPVSI IAEVDIYKFD PWELPVQAAF 60 GEKEWYFFTP RDRKYPNGAR PNRAAASGYW KATGTDKPIL STVGKENIGV KKALVFYKGR 120 PPKGVKTNWI MHEYRLAEAP NMSKPMRMKE SSMRLDDWVL CRIYRKNIPL PMASAMNREQ 180 EDHSFEDQSV ATFPNITNQS AFELPKSSSF SDLLAFNDFS VLSRLLADNP SDSVGSEPGP 240 FYTNADINQP MVSSSSSYLL HQKLPQQELS AFSSENQLKR QRPMALSSDE GVLHHTSKKF 300 NNNSCNFTNI TNQLDTPQYN LLNQSFFNQQ ILLNSHLEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-100	NAC family protein