PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75721.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family E2F/DP
Protein Properties Length: 366aa    MW: 40868.5 Da    PI: 7.3029
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP60.62.5e-191341942671
     E2F_TDP  26 tlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++ +va+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  RWR75721.1 134 KYFQVADELVAEftdpssslaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 194
                 6789************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MVICGNQQED EEKNPISFSR GATRSWGTTI SGQSISTSGS AGSPSSRSEP TMVPPAVCDN  60
TSVQLNQMDS QGDDAVSQGA FGSKKKKRGA RAVGNDKGGR GLRQFSMKVC EKVESKGRTT  120
YNEVSSFPSS TYWKYFQVAD ELVAEFTDPS SSLASPDQQQ YDEKNIRRRV YDALNVLMAM  180
DIISKDKKEI QWKGLPRTSL NDVEELKAER IGLRNRIEKK TAYLKELEDQ FIDLKNLVQR  240
NEQLYGSGNA PSGGVTLPFI LVQTRPHATV EVEISEDMQL VHFDFNSTPF ELHDDAYVLK  300
AMRSRENEQN DTPHESTSNG GESSRIPSLY QHHHIPHSSR SNTIGKWPNS PRVPGILKAT  360
RVKHEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-133E2F/DP family protein