PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 182aa MW: 20743.8 Da PI: 4.3209 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.1 | 2.4e-21 | 2 | 140 | 1 | 122 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lp+G++F Ptdeel +yL++kv+g+++++ +vi+e+d+ +++P +L+ ++++++ ++yfF+k ++ + ++ + +gy ++tg +++ l+ +g RWR75651.1 2 LPAGYKFLPTDEELFLHYLQPKVSGSQMPV-NVIPEIDLQNYDPTHLQgMAFNNGCGDYYFFTKDHQGMMSPDQL--SNGEGYYENTGINEPALNGNGI 97 799***************************.99**************9556666666888888887766543333..5579**************9*** PP NAM 99 lvglkktLvfy...................kgrapkgektdWv 122 l+g+k+++ + +g++++g++ +W+ RWR75651.1 98 LIGTKRSFSYKlhnditctmyeyrlaggnsTGQTQQGQQQQWM 140 *********9855555555554444444444566666666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MLPAGYKFLP TDEELFLHYL QPKVSGSQMP VNVIPEIDLQ NYDPTHLQGM AFNNGCGDYY 60 FFTKDHQGMM SPDQLSNGEG YYENTGINEP ALNGNGILIG TKRSFSYKLH NDITCTMYEY 120 RLAGGNSTGQ TQQGQQQQWM LVKIVHKQEK QQFENRFNVN DDDFQPLTDS DSDHNDDQVL 180 EG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 5e-20 | NAC family protein |