PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75501.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 450aa MW: 49017.3 Da PI: 5.8268

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.4	4.3e-07	388	420	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+++++++L +++gL+ +q+ +WF N+R + RWR75501.1 388 WPYPTEDDKARLVQETGLQLKQINNWFINQRKR 420 58*****************************87 PP
2	ELK	27.9	5.3e-10	341	362	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh L+++Y+++++++++E++ RWR75501.1 341 ELKHDLKQGYKEKIVDIREEIL 362 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MAYHNHLPHE MALPHFADQQ LGESPSVLRS IIPDHLGQPS SSDAANSAGK PPGGSNAPTW 60 LNSAILRQQS QYADRSFLHL QTASDSAASA GGSQWLPRSV LQRNASDVGG GSDGVPVSSD 120 SMMAAAGMSQ GSADLNGGNR NQAASSGGEM ADGDGGAAAA TEQGDVAAPW QSARYKADIL 180 AHQLYEQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVA KYSMLGHGNQ LLVGEDKELD 240 QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWELEQSLQ SLTGVSPGEG TGATMSDDED 300 DQAESDPNLY DGSLDGTDSL GFGPLVPTES ERSLMERVRQ ELKHDLKQGY KEKIVDIREE 360 ILRKRRAGKL PGDTTSLLKS WWQSHSKWPY PTEDDKARLV QETGLQLKQI NNWFINQRKR 420 NWHSNPSSST VTKSKRKRSN AGDNNAEQFM

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MAYHNHLPHE MALPHFADQQ LGESPSVLRS IIPDHLGQPS SSDAANSAGK PPGGSNAPTW  60
LNSAILRQQS QYADRSFLHL QTASDSAASA GGSQWLPRSV LQRNASDVGG GSDGVPVSSD  120
SMMAAAGMSQ GSADLNGGNR NQAASSGGEM ADGDGGAAAA TEQGDVAAPW QSARYKADIL  180
AHQLYEQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVA KYSMLGHGNQ LLVGEDKELD  240
QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWELEQSLQ SLTGVSPGEG TGATMSDDED  300
DQAESDPNLY DGSLDGTDSL GFGPLVPTES ERSLMERVRQ ELKHDLKQGY KEKIVDIREE  360
ILRKRRAGKL PGDTTSLLKS WWQSHSKWPY PTEDDKARLV QETGLQLKQI NNWFINQRKR  420
NWHSNPSSST VTKSKRKRSN AGDNNAEQFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	418	438	RKRNWHSNPSSSTVTKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-172	TALE family protein