PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75483.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 271aa    MW: 29721.9 Da    PI: 6.919
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002291113123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  RWR75483.1  91 FSCNYCQRKFYSSQALGGHQNAH 113
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEAYITEVCA SDTSSLSAAE VPCKDHAEEE EEEEEKIGGS QRPEFDLSLD LSLSTRGSSI  60
MELNLMDSLD AGTSQQSPER QIHEAEPTRI FSCNYCQRKF YSSQALGGHQ NAHKRERTLA  120
KRGRGDVMAF GDHHSHRYHQ YPSMSSLPLH GSLNRSLGIQ AHSMIHKPYL PSGHGFSYGH  180
RGWSRPPIEQ QPAIGKLATE NYLTGGSSSS RVTAATTPSM KGAAPRFDGS CSVRTFGSSG  240
MGSDDSVHWC PNGRVNAHQK ESQKLDLSLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.17e-42C2H2 family protein