PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75242.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 331aa    MW: 35020.1 Da    PI: 6.6777
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.3e-16234270135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  RWR75242.1 234 CTHCGISHkaTPMMRRGPEGPRTLCNACGLKWANKGT 270
                 *****9999*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MDGGNNMPVQ DQMSGGDHVH MLAAAAAMSM PGQIDAVQGS GTAGDPQLVQ VVAGDPMQAH  60
YIQQGVGIGE EQGGVGDGGG GAGDGGANVG MVVEVAAEQE QQVGVATRSQ TANQLTLSFQ  120
GEVYVFESVS PEKVQAVLLL LGGREVPTGS ASASHQNNNR GNVPERAASL IRFREKRKER  180
NYEKKVRYNV RKQVALRMQR YKGQFTSAKV TEEGTPEERM ALKSSQSPPR VTECTHCGIS  240
HKATPMMRRG PEGPRTLCNA CGLKWANKGT LRDLSKGTPG STHNPLGHLN DEQVEAMDVQ  300
PLHTSAIPQG DEAVLQTPPP SKAAANGHED S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177193RKERNYEKKVRYNVRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.22e-60GATA family protein