PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR75221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 322aa MW: 36031.7 Da PI: 9.8204 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.1 | 4e-54 | 11 | 141 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+++yL++k+++++++ ++i++vd++k+ePwdLp k+k +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdke++++ RWR75221.1 11 LPPGFRFHPTDEELITYYLTHKIADTSFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFNLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFKSatat 108 79*************************999.89***************99999****************************************998877 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyr 127 ++elvg+kktLvfykgrap+gekt+Wv+heyr RWR75221.1 109 aTSELVGMKKTLVFYKGRAPRGEKTNWVIHEYR 141 77778***************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MDEVVAKEET LPPGFRFHPT DEELITYYLT HKIADTSFTG RAIADVDLNK CEPWDLPGKA 60 KMGEKEWYFF NLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFKSATATAT SELVGMKKTL 120 VFYKGRAPRG EKTNWVIHEY RRQSKSGFKT AKDAWVVCRV FQKSSGVKRY HSHAQSKANS 180 NSNSNPNPYY NLDMGTNIVA PVVMQADGRS YVSNADLAAG LTRVFRVTPG VNFPTQPNYP 240 GNFALSGINI NLSRGTSRAP TPGPAPNQPP APMLPTATTL PISMPVTRMT ESGMCSDMHH 300 YGTTRFQHMD PNVDLDSYWP PY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 3e-93 | NAC family protein |