PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR75206.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 957aa MW: 109509 Da PI: 8.015

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR75206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.8	6.6e-27	75	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA+++GFs+r+s ++s+r+g+++ +fvC+keg+r+++ k+ tr++tr gCka++kvkk ++gkw+v kl++eHnH++a RWR75206.1 75 SFYNGYARRTGFSIRTSLRRRSRRDGTTIGMEFVCYKEGFRRKKCKS------TRPHTREGCKAMIKVKKLDSGKWVVVKLVKEHNHAMA 158 5***************************************99888......9*******************************986 PP
2	FAR1	80.6	2.8e-25	250	332	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y+eYA+++GFs+r++ ++s+r+g+++ +fvCskeg+r+++ k+ +r tr gCk ++kvkk+++gkw+vtk+ ++HnH+l+ RWR75206.1 250 LYCEYARRAGFSIRTNLRRRSRRDGTTIGLEFVCSKEGFRRKKCKS------NRRPTREGCKQMIKVKKQDSGKWVVTKFLKDHNHALV 332 59*************************************99888......9999*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MMECTANDNT SDEPHMRSEV EVEHNTSDGN ADAHVGETDL NVGNPVRKPS SESQQPASVD 60 PYVGMEFDSD EAAKSFYNGY ARRTGFSIRT SLRRRSRRDG TTIGMEFVCY KEGFRRKKCK 120 STRPHTREGC KAMIKVKKLD SGKWVVVKLV KEHNHAMATP TEVSLLRSHR CGSDESTRSN 180 HIASPLRDCT SYIKMLRKRT LGRDVDTHAG EIDEVVENPV GKASIESEES ANLEPYVGME 240 FESEEAMTIL YCEYARRAGF SIRTNLRRRS RRDGTTIGLE FVCSKEGFRR KKCKSNRRPT 300 REGCKQMIKV KKQDSGKWVV TKFLKDHNHA LVTSGKAPLF QCHKVIPSQS GGTSNMSITL 360 QDRKNHSQNF RKRIFGRDAQ DVLEYFKHMQ AKNASFIYAI KVDSEHHMTN FFWVDARSRM 420 AYYCFGDVVT FDTTYGIDQC GIPLVLFMGV NHHKQPVLFG CALLLDETEA SFVWLFNTWL 480 ETMSGRQPMS FLSNQDPVIE AAIAKTMPKT RHHFSKKDIL RKFPDKLGHM ENKQEDFVRD 540 FSDCIGFTEL HDEFELCWRS LIDRYELKEN EWFQSLYRNR ERWVHVYLRE TSFANMGTIQ 600 QTESMNPFFD DYVNPQTPLQ LLVNHCEKSI DCQYELELKE DLKANYMKPV MKTGLAMESQ 660 AAEIYTRTIF LEFQEQLFQS LHHTAEIIKE DGSVTTLRVI EFGVEKREYT VTFRDSEAKA 720 SCSCQMFEYA GILCRHVLRV FSMKNVMVLP SHYVLKRWAK HAMSGVAFDE KDIGISGDCQ 780 ESWASRYNDL SRQAIKYAGE AATSLNIYGV AMHALQKAFE EIDSAKKDDG IVTQPSIPVF 840 GSIHSVNTCE GNPTDNTMSN RTLCEPHHEK AKGRSATSLE HTGELQQKKK RKCQICQHPD 900 HDKRKCPHLR GAGTNVNNAG GALENPHLHG GIAGEQFGFS EKFQIVPMND NHFLRYV

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MMECTANDNT SDEPHMRSEV EVEHNTSDGN ADAHVGETDL NVGNPVRKPS SESQQPASVD  60
PYVGMEFDSD EAAKSFYNGY ARRTGFSIRT SLRRRSRRDG TTIGMEFVCY KEGFRRKKCK  120
STRPHTREGC KAMIKVKKLD SGKWVVVKLV KEHNHAMATP TEVSLLRSHR CGSDESTRSN  180
HIASPLRDCT SYIKMLRKRT LGRDVDTHAG EIDEVVENPV GKASIESEES ANLEPYVGME  240
FESEEAMTIL YCEYARRAGF SIRTNLRRRS RRDGTTIGLE FVCSKEGFRR KKCKSNRRPT  300
REGCKQMIKV KKQDSGKWVV TKFLKDHNHA LVTSGKAPLF QCHKVIPSQS GGTSNMSITL  360
QDRKNHSQNF RKRIFGRDAQ DVLEYFKHMQ AKNASFIYAI KVDSEHHMTN FFWVDARSRM  420
AYYCFGDVVT FDTTYGIDQC GIPLVLFMGV NHHKQPVLFG CALLLDETEA SFVWLFNTWL  480
ETMSGRQPMS FLSNQDPVIE AAIAKTMPKT RHHFSKKDIL RKFPDKLGHM ENKQEDFVRD  540
FSDCIGFTEL HDEFELCWRS LIDRYELKEN EWFQSLYRNR ERWVHVYLRE TSFANMGTIQ  600
QTESMNPFFD DYVNPQTPLQ LLVNHCEKSI DCQYELELKE DLKANYMKPV MKTGLAMESQ  660
AAEIYTRTIF LEFQEQLFQS LHHTAEIIKE DGSVTTLRVI EFGVEKREYT VTFRDSEAKA  720
SCSCQMFEYA GILCRHVLRV FSMKNVMVLP SHYVLKRWAK HAMSGVAFDE KDIGISGDCQ  780
ESWASRYNDL SRQAIKYAGE AATSLNIYGV AMHALQKAFE EIDSAKKDDG IVTQPSIPVF  840
GSIHSVNTCE GNPTDNTMSN RTLCEPHHEK AKGRSATSLE HTGELQQKKK RKCQICQHPD  900
HDKRKCPHLR GAGTNVNNAG GALENPHLHG GIAGEQFGFS EKFQIVPMND NHFLRYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-169	FAR1 family protein