PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75027.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 85aa    MW: 10217 Da    PI: 9.8117
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.9e-14855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEd ll ++++++G g W+ ++ + g++R+ k+c++rw++yl
       RWR75027.1  8 KGAWAEEEDILLRKCIEKFGEGKWRQVPFKAGLRRCHKSCRLRWLNYL 55
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MEHLGVRKGA WAEEEDILLR KCIEKFGEGK WRQVPFKAGL RRCHKSCRLR WLNYLKPDIK  60
RGEFEEDEVD LIIRLHKLLG NRQVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-39MYB family protein