PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75001.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 340aa    MW: 37429.1 Da    PI: 6.6537
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.5e-14162208354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  RWR75001.1 162 KSHSEAERRRRERINKHLARLRSLLPST-----TKTDKASLLAEVIQHVKEL 208
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGGKVEDERE AAQRFHEFQT HQEHQMFQQH QQYNDGYTGV VLGGGHLIPE TNPILPWSFP  60
PIHTFNPAHF PTNQVRDYDH LLAPPSSSSS SYGGLYSRRA AALQLGYDSS SSDPLGLASL  120
YIGSDSLGQA GRAGSIPFGL QAELGRMTAQ ELMDAKALAA SKSHSEAERR RRERINKHLA  180
RLRSLLPSTT KTDKASLLAE VIQHVKELKR QTSEIAEASP LPTEVDELIV GPADEEDGRF  240
LIKASLCCDD RSDLLSDLIK TLKALRLRTL KAEITTLGGR VKNVLLITGE EDCKGIEQHS  300
LNAIQEALKA VMERTAAEDS SSGNLKRQRT NISILENRSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168173ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-59bHLH family protein