PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74918.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 491aa MW: 53487.9 Da PI: 6.0965

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.6	3.3e-39	107	164	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +k+++cprC s++tkfCyynny+++qPr+fC++C+ryWt+GGa+rnvPvG+grrknk+ RWR74918.1 107 DKIIPCPRCSSMDTKFCYYNNYNVNQPRHFCRNCQRYWTAGGAMRNVPVGAGRRKNKH 164 7899****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MKLFGTTISL PVTPIPADSL QKPDPIPAFD NEKGVCRQET HNQPEASVPG VTEEPAGPNC 60 SSGVENGKDE NQTSIEDNRS AVVPNLEEEQ IETDAASEEQ KVLKKIDKII PCPRCSSMDT 120 KFCYYNNYNV NQPRHFCRNC QRYWTAGGAM RNVPVGAGRR KNKHLVPHYH RMVMPTDGMP 180 ASHVKVTHLA SHQVLPCRLS DAPVPQKGNG TVLNFGPDVP LYEPIGAVLN LGDKKKKTEQ 240 GSVSCVGNGD EPSCGSTETA SSCLENELPK KGGWMEQEPC CSGYPPLHFQ YYPGQPWSYP 300 WGSGWNNVAA MTPGRWSSEL VYEPDNGNSG LVQWNSSPMV AAPPFCAPSI PIPFLPTSDW 360 GSMPGWAGRS WDVPWGPSKC SGPLSSSTSN SVCSGNGSPT LGKHSRDETL KDEEKTEVSA 420 GSQDAENYDP DESTKSFIWA ALGTKLEPAT QGIYKAFHPK MEGKGHILNA KQVLQANPAA 480 LARFQMFQER V

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MKLFGTTISL PVTPIPADSL QKPDPIPAFD NEKGVCRQET HNQPEASVPG VTEEPAGPNC  60
SSGVENGKDE NQTSIEDNRS AVVPNLEEEQ IETDAASEEQ KVLKKIDKII PCPRCSSMDT  120
KFCYYNNYNV NQPRHFCRNC QRYWTAGGAM RNVPVGAGRR KNKHLVPHYH RMVMPTDGMP  180
ASHVKVTHLA SHQVLPCRLS DAPVPQKGNG TVLNFGPDVP LYEPIGAVLN LGDKKKKTEQ  240
GSVSCVGNGD EPSCGSTETA SSCLENELPK KGGWMEQEPC CSGYPPLHFQ YYPGQPWSYP  300
WGSGWNNVAA MTPGRWSSEL VYEPDNGNSG LVQWNSSPMV AAPPFCAPSI PIPFLPTSDW  360
GSMPGWAGRS WDVPWGPSKC SGPLSSSTSN SVCSGNGSPT LGKHSRDETL KDEEKTEVSA  420
GSQDAENYDP DESTKSFIWA ALGTKLEPAT QGIYKAFHPK MEGKGHILNA KQVLQANPAA  480
LARFQMFQER V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-49	Dof family protein