PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74471.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 805aa MW: 92517.6 Da PI: 7.4855

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.4	3.1e-25	48	136	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn++A++vGFsvrk+ ++ +++g +++r++vCskeg+r +k++ ++ +++r etrtgC+a ++v+ + +gk++vt+ +l HnH+la RWR74471.1 48 DFYNKHARKVGFSVRKNWRTTDRKTGLVKTRRYVCSKEGHRVADKRD-KNVKHHRDETRTGCEAFMTVRIQLNGKYRVTETNLLHNHPLA 136 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 805 aa Download sequence
MKYNSSMGAQ TKDNLTKPKV PMHDKGNDDG VPDPKVGMEF ENEGDVYDFY NKHARKVGFS 60 VRKNWRTTDR KTGLVKTRRY VCSKEGHRVA DKRDKNVKHH RDETRTGCEA FMTVRIQLNG 120 KYRVTETNLL HNHPLATPHQ VHLLRSQRKF SVANAAVAND SDSSGSTPKN VEFMSREGEG 180 QENVGCIPVD SKHYLRSKRM KAIQKFDAGG LLEYFKNRQL EDPSFFYSIQ LDADDRIANV 240 FWSDGRMLID YELFGDVVCF DTACKTDEYG RPFAPFIGVN HHRQVNIFGA AFIYDETTDS 300 FRWLFRTFCD AMSGKKPTLI FTDQNKLMEN AIEIELPKTV HRISVWHMFQ NALKHLSHVF 360 CASHSFSNDF SKCVYDCEEE DEFLQAWDDM IKKYSLVDNT WLQQLFNERE KWAVVYGRDT 420 FCADMNSILQ DGSLKEELKR YLHPTRNILQ FFEDFQRMVD EKRYAELKAN FKMTQSSPKV 480 IVPVDILTHA SSVYTPKMFE MFQTEYVNGL NCIVKGCTEV GAVKKYEVFD GKGRCHVVTL 540 DSMDEAIVTC SCKKYEFLGI LCGHVLRVIG NTIRFVPTKY ILKRWTQEAS TLSLKMPSSG 600 FKSGDDHKKA FSRRYNHLVF NFVKVATRAS ESEEAYRCAT NLLDKMWQDI ERIWRNLAHA 660 EPSINVDLER IWRNLAHEEP SIDVESLSDE GGAQDDSLKL TVDDLQFKEA YEFRRKMGSG 720 TGGHSMKGFF EKPPASSTVH SNTCPAPIYY PVPSTPPTLF LQGNSPHDFY RESVHSMSNL 780 SRESSLFGTP QQFIIGSSSR ESSKE

Sequence ? help Back to Top

Protein Sequence Length: 805 aa Download sequence

MKYNSSMGAQ TKDNLTKPKV PMHDKGNDDG VPDPKVGMEF ENEGDVYDFY NKHARKVGFS  60
VRKNWRTTDR KTGLVKTRRY VCSKEGHRVA DKRDKNVKHH RDETRTGCEA FMTVRIQLNG  120
KYRVTETNLL HNHPLATPHQ VHLLRSQRKF SVANAAVAND SDSSGSTPKN VEFMSREGEG  180
QENVGCIPVD SKHYLRSKRM KAIQKFDAGG LLEYFKNRQL EDPSFFYSIQ LDADDRIANV  240
FWSDGRMLID YELFGDVVCF DTACKTDEYG RPFAPFIGVN HHRQVNIFGA AFIYDETTDS  300
FRWLFRTFCD AMSGKKPTLI FTDQNKLMEN AIEIELPKTV HRISVWHMFQ NALKHLSHVF  360
CASHSFSNDF SKCVYDCEEE DEFLQAWDDM IKKYSLVDNT WLQQLFNERE KWAVVYGRDT  420
FCADMNSILQ DGSLKEELKR YLHPTRNILQ FFEDFQRMVD EKRYAELKAN FKMTQSSPKV  480
IVPVDILTHA SSVYTPKMFE MFQTEYVNGL NCIVKGCTEV GAVKKYEVFD GKGRCHVVTL  540
DSMDEAIVTC SCKKYEFLGI LCGHVLRVIG NTIRFVPTKY ILKRWTQEAS TLSLKMPSSG  600
FKSGDDHKKA FSRRYNHLVF NFVKVATRAS ESEEAYRCAT NLLDKMWQDI ERIWRNLAHA  660
EPSINVDLER IWRNLAHEEP SIDVESLSDE GGAQDDSLKL TVDDLQFKEA YEFRRKMGSG  720
TGGHSMKGFF EKPPASSTVH SNTCPAPIYY PVPSTPPTLF LQGNSPHDFY RESVHSMSNL  780
SRESSLFGTP QQFIIGSSSR ESSKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein