PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR74442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28086.9 Da PI: 5.9376 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 53 | 103 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr+++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a+++++g+ RWR74442.1 53 RYLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMRGA 103 689******.**********965...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDFNHYPPNL SSSSSSSSSS ASSISISPSS EKKKPRKKQQ PSQSQQQDTP SNRYLGVRRR 60 PWGRYAAEIR DPTTKERHWL GTFDTAEEAA LAYDRAARSM RGARARTNFA YRDMPPGSSL 120 TSILSPDDVH FSDWFPAALP NNIINSTHIP GGSHCSTEQG LLPLPPSLLP SQTNVAVPEV 180 SGSDMSVSDP IYGSGQVTWP NETQDLFGFS EPASGCESVF AAGSEGYLHS PLFGRMPVVS 240 DSVPNVMDGF DLGSSAYFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 5e-26 | ERF family protein |