PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR74374.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 442aa MW: 50686.1 Da PI: 7.661

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR74374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	195	218	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++ +Lk+H r H RWR74374.1 195 YICGVCGRKCNTRLDLKKHFRQlH 218 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MKLMNPFLLP NPQTLLHPHN PPPNLITFNP TTRFHSHFLH PPFHSPHPPP TPKTHNPRKP 60 PSPCTISCTS TANFNSTTPS PQSNKRWRTK SSSGLGGAAA EVEMVKNRDG VFTAKQKKVV 120 LLWDLDNKPP RGPPYSAAVA LRDVAQRFGR LVDMSAYANR HAFTHLPSWV LNDRRERRRT 180 DILERKGLVL PPEPYICGVC GRKCNTRLDL KKHFRQLHER ERQKKLNRMR SLKGKKRQKY 240 KERFISGNRK YQEAERELLT PKVGYGLASE LRRAGVFVKT VEDKPQAADW TIKRQMEHSI 300 TQGIDWLLLV SDDSDFSGML CRARESKMRT VVIGDDGQRA LGRYADIWVP WINVENGEVD 360 DEMLRPSARV DEFDGDFEEE EGGFFSLSHF DDEEDDESDV DSVVDEIVVT SSGFNRLISA 420 FSEEDLYWDD DGVEREAEEG YY

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MKLMNPFLLP NPQTLLHPHN PPPNLITFNP TTRFHSHFLH PPFHSPHPPP TPKTHNPRKP  60
PSPCTISCTS TANFNSTTPS PQSNKRWRTK SSSGLGGAAA EVEMVKNRDG VFTAKQKKVV  120
LLWDLDNKPP RGPPYSAAVA LRDVAQRFGR LVDMSAYANR HAFTHLPSWV LNDRRERRRT  180
DILERKGLVL PPEPYICGVC GRKCNTRLDL KKHFRQLHER ERQKKLNRMR SLKGKKRQKY  240
KERFISGNRK YQEAERELLT PKVGYGLASE LRRAGVFVKT VEDKPQAADW TIKRQMEHSI  300
TQGIDWLLLV SDDSDFSGML CRARESKMRT VVIGDDGQRA LGRYADIWVP WINVENGEVD  360
DEMLRPSARV DEFDGDFEEE EGGFFSLSHF DDEEDDESDV DSVVDEIVVT SSGFNRLISA  420
FSEEDLYWDD DGVEREAEEG YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-139	C2H2 family protein