PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR74204.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 480aa    MW: 54814.2 Da    PI: 9.713
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR74204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79e-18191091100
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+l ps+ +++    +p++f++++   +e s    l+ +sgr+W+v+l  + ++g + + kGWkeFv+++ L  g  +vF++dg+s+f  +v +f++
  RWR74204.1  19 FFKILFPSYLHEL---PIPRRFIQKFR--EELSDVALLKGPSGRVWRVEL--KETDGIVCFLKGWKEFVDSHSLSIGYLLVFRYDGNSQF--NVLIFDR 108
                 8999999998875...6******9997..45777888999**********..99999999999***************************..9999998 PP

                 S CS
          B3 100 s 100
                 s
  RWR74204.1 109 S 109
                 5 PP
2B356.93.7e-18366459197
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 f  v t s+  +  r+ +p +fae+h      +++ + le+++gr+W+v + yr ++ + +l++GW+ F  +n++  gD++ F+l++r++  l+v+v+
  RWR74204.1 366 FMVVITASHLRNGPRMQVPTNFAEKHfT-G--RERYICLESSDGRKWSVGCLYRPRR-ALFLSGGWSAFLFDNNIGGGDVCAFELVNRKGNVLKVTVY 459
                 444556666666689***********53.3..4457***************777765.799*************************999998888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MRKVPDNPQQ FPAKRPPFFF KILFPSYLHE LPIPRRFIQK FREELSDVAL LKGPSGRVWR  60
VELKETDGIV CFLKGWKEFV DSHSLSIGYL LVFRYDGNSQ FNVLIFDRSA CEKEYPYATE  120
NDEESCSNNG SCSPEKKSDD SVEIVGVSKI ENRVPQKTKR GYKYMPRVLR SSLRLQSNAM  180
KMKLNSETKS KANNENKRKD TSEELLSQSE SRQSKSQKSV GSESLRRVES PDHLLLQQER  240
GSNKFIQPNG KNLMESIHKN VSDCSKEKTP SEPTPVASEN ESTECYVPSS GEKISVKIEI  300
QESEPDGLSS SSEDVNYFQE PKEGVMPRKR RACRKFIMSS RGPLAAERKQ KALIEATKFN  360
SDNPFFMVVI TASHLRNGPR MQVPTNFAEK HFTGRERYIC LESSDGRKWS VGCLYRPRRA  420
LFLSGGWSAF LFDNNIGGGD VCAFELVNRK GNVLKVTVYP GDEVLPLNQL SQKWNRRRQT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1328351RKRRACRKFIMSSRGPLAAERKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-26B3 family protein